Cleaning and some little tweaks.

[master-thesis.git] / Parasitemia / ParasitemiaCore / Analysis.fs

diff --git a/Parasitemia/ParasitemiaCore/Analysis.fs b/Parasitemia/ParasitemiaCore/Analysis.fs
index bad0daf..7f58463 100644 (file)
--- a/Parasitemia/ParasitemiaCore/Analysis.fs
+++ b/Parasitemia/ParasitemiaCore/Analysis.fs
@@ -67,7 +67,9 @@ let doAnalysis (img: Image<Bgr, byte>) (name: string) (config: Config) (reportPr
         let range =
             let delta = config.Parameters.granulometryRange * config.RBCRadiusByResolution.Pixel
             int <| config.RBCRadiusByResolution.Pixel - delta, int <| config.RBCRadiusByResolution.Pixel + delta
+
         let! radius = logTimeWithName "Granulometry (area)" (fun() -> reportWithVal 10 (Granulometry.findRadiusByAreaClosing img_RBC_filtered range |> float32))
+        //let! radius = logTimeWithName "Granulometry (morpho)" (fun() -> reportWithVal 10 (Granulometry.findRadiusByClosing img_RBC_filtered range 1. true |> float32))
         config.SetRBCRadius <| radius
 
         logWithName (sprintf "Found erythrocyte diameter: %A" config.RBCRadius)
@@ -119,8 +121,8 @@ let doAnalysis (img: Image<Bgr, byte>) (name: string) (config: Config) (reportPr
                 IO.saveImg parasites.parasite (buildFileName " - parasites - stain.png")
                 IO.saveImg parasites.nucleus (buildFileName " - parasites - infection.png")
 
-                let imgAllEllipses = img.Copy()
-                Drawing.drawEllipses imgAllEllipses matchingEllipses.Ellipses (Bgr(255.0, 255.0, 255.0)) 0.04
+                let imgAllEllipses = img_RBC_filtered.Copy()
+                Drawing.drawEllipses imgAllEllipses matchingEllipses.Ellipses (Gray(200.0)) 0.04
                 IO.saveImg imgAllEllipses (buildFileName " - ellipses - all.png")
 
                 let imgEllipses = img_RBC_filtered.Convert<Bgr, byte>()