Add a logger assembly and split the main assembly in two : the UI and the parasitemia...

[master-thesis.git] / Parasitemia / Parasitemia / Program.fs

diff --git a/Parasitemia/Parasitemia/Program.fs b/Parasitemia/Parasitemia/Program.fs
deleted file mode 100644 (file)
index 06059f6..0000000
--- a/Parasitemia/Parasitemia/Program.fs
+++ /dev/null
@@ -1,94 +0,0 @@
-module Parasitemia.Main
-
-open System
-open System.IO
-open System.Threading
-
-open Emgu.CV
-open Emgu.CV.Structure
-
-open Config
-
-type Input =
-    | File of string
-    | Dir of string
-
-type RunningMode =
-    | CmdLine of Input * string // A file or a directory to process and the output directory.
-    | Window of string option // An optional path to a file to open can be given in window mode.
-
-type Arguments = RunningMode * bool
-
-let parseArgs (args: string[]) : Arguments =
-
-    let output = Array.tryFindIndex ((=) "--output") args
-
-    let runningMode =
-        match Array.tryFindIndex ((=) "--folder") args, output with
-        | Some i, Some i_output when i < args.Length - 2 && i_output < args.Length - 2 ->
-            CmdLine ((Dir args.[i+1]), args.[i_output + 1])
-        | _ ->
-            match Array.tryFindIndex ((=) "--file") args, output with
-            | Some i, Some i_output when i < args.Length - 2 && i_output < args.Length - 2 ->
-                CmdLine ((File args.[i+1]), args.[i_output + 1])
-            |_ ->
-                Window (if args.Length > 0 && not (args.[0].StartsWith("--")) then Some args.[0] else None)
-
-    runningMode, Array.exists ((=) "--debug") args
-
-[<EntryPoint>]
-[<STAThread()>]
-let main args =
-
-    let e = Ellipse.ellipse2 -11.4 -7.8 -0.169811 -23.75 0.8 -3.885714 -19. 1.5
-
-    match parseArgs args with
-    | mode, debug ->
-        let config = Config(defaultParameters)
-
-        match mode with
-        | CmdLine (input, output) ->
-            if debug
-            then
-                config.Debug <- DebugOn output
-
-            Directory.CreateDirectory output |> ignore
-
-            use logFile = new StreamWriter(new FileStream(Path.Combine(output, "log.txt"), FileMode.Append, FileAccess.Write))
-            Utils.log <- (fun m -> logFile.WriteLine(m))
-            Utils.log (sprintf "=== New run : %A %A ===" DateTime.Now  (if debug then "[DEBUG]" else "[RELEASE]"))
-
-            let files = match input with
-                        | File file -> [ file ]
-                        | Dir dir -> Directory.EnumerateFiles dir |> List.ofSeq
-
-            use resultFile = new StreamWriter(new FileStream(Path.Combine(output, "results.txt"), FileMode.Append, FileAccess.Write))
-
-            //try
-            let images = [ for file in files -> Path.GetFileNameWithoutExtension(FileInfo(file).Name), config.Copy(), new Image<Bgr, byte>(file) ]
-
-
-            Utils.logTime "Whole analyze" (fun () ->
-                let results = ImageAnalysis.doMultipleAnalysis images None
-
-                for id, cells in results do
-                    let config = images |> List.pick (fun (id', config', _) -> if id' = id then Some config' else None)
-                    let total, infected = Utils.countCells cells
-                    fprintf resultFile "File: %s %d %d %.2f (diameter: %A)\n" id total infected (100. * (float infected) / (float total)) config.RBCRadius)
-
-            //Utils.log (sprintf "== File: %A" file)
-            //with
-            //| :? IOException as ex -> Utils.log (sprintf "Unable to open the image '%A': %A" file ex)
-            0
-
-        | Window fileToOpen ->
-            (*let display (window : Views.MainWindow) (img : IImage) =
-               let imgControl = window.Root.FindName("img") :?> Controls.Image
-               imgControl.Source <- BitmapSourceConvert.ToBitmapSource(img)
-
-            let log (window : Views.MainWindow) (mess : string) =
-               let txtLog = window.Root.FindName("txtLog") :?> Controls.TextBlock
-               txtLog.Text <- txtLog.Text + mess + "\n"*)
-
-            if debug then config.Debug <- DebugOn "."
-            GUI.Main.run config fileToOpen