Add a logger assembly and split the main assembly in two : the UI and the parasitemia...

[master-thesis.git] / Parasitemia / Parasitemia / GUI / PiaZ.fs

diff --git a/Parasitemia/Parasitemia/GUI/PiaZ.fs b/Parasitemia/Parasitemia/GUI/PiaZ.fs
deleted file mode 100644 (file)
index d551b8d..0000000
--- a/Parasitemia/Parasitemia/GUI/PiaZ.fs
+++ /dev/null
@@ -1,87 +0,0 @@
-// ParasitemIA Zipped file format.
-module Parasitemia.GUI.PiaZ
-
-open System
-open System.Windows
-open System.IO
-open System.IO.Compression
-
-open Emgu.CV
-open Emgu.CV.Structure
-
-open Newtonsoft.Json
-open Newtonsoft.Json.Converters
-
-open Types
-
-let extension = ".piaz"
-let filter = "PIA|*.piaz"
-
-// Information associated to a document.
-type JSONInformation = {
-    patientID: string
-}
-
-// Information associated to each images.
-type JSONSourceImage = {
-    num: int
-    RBCRadius: float32 // The RBC Radius found by granulometry.
-    parameters: Config.Parameters
-    dateLastAnalysis: DateTime
-    rbcs: RBC List
-}
-
-type FileData = {
-    patientID: string
-    images: SourceImage list
-}
-
-let mainEntryName = "info.json"
-let imageExtension = ".tiff"
-
-let save (filePath: string) (data: FileData) =
-    use file = ZipFile.Open(filePath, ZipArchiveMode.Update)
-
-    for e in List.ofSeq file.Entries do // 'ofSeq' to not iterate a collection currently modified.
-        e.Delete()
-
-    // Main JSON file.
-    let mainEntry = file.CreateEntry(mainEntryName, CompressionLevel.Fastest)
-    use mainEntryWriter = new StreamWriter(mainEntry.Open())
-    mainEntryWriter.Write(JsonConvert.SerializeObject({ JSONInformation.patientID = data.patientID }))
-
-    // Write each images and the associated information.
-    for srcImg in data.images do
-        let imgFilename = (string srcImg.num) + imageExtension
-        let imgEntry = file.CreateEntry(imgFilename, CompressionLevel.NoCompression) // FIXME: It seems a compression is applied to this file despite of the 'NoCompression' flag.
-        srcImg.img.ToBitmap().Save(imgEntry.Open(), System.Drawing.Imaging.ImageFormat.Tiff)
-
-        let imgJSONEntry = file.CreateEntry(imgFilename + ".json", CompressionLevel.Fastest)
-        use imgJSONFileWriter = new StreamWriter(imgJSONEntry.Open())
-        imgJSONFileWriter.Write(JsonConvert.SerializeObject({ num = srcImg.num; RBCRadius = srcImg.config.RBCRadius.Pixel; parameters = srcImg.config.Parameters; dateLastAnalysis = srcImg.dateLastAnalysis; rbcs = srcImg.rbcs }))
-
-
-let load (filePath: string) : FileData =
-    use file = ZipFile.Open(filePath, ZipArchiveMode.Read)
-
-    let mainEntry = file.GetEntry(mainEntryName)
-    use mainEntryReader = new StreamReader(mainEntry.Open())
-    let info = JsonConvert.DeserializeObject<JSONInformation>(mainEntryReader.ReadToEnd())
-
-    { patientID = info.patientID
-      images = [ let mutable imgNum = 0
-                 for imgEntry in file.Entries do
-                    if imgEntry.Name.EndsWith(imageExtension)
-                    then
-                        let img = new Image<Bgr, byte>(new System.Drawing.Bitmap(imgEntry.Open(), false)) // FIXME: Should we dispose the bitmap?
-                        imgNum <- imgNum + 1
-                        let imgEntry = file.GetEntry(imgEntry.Name + ".json")
-                        use imgEntryFileReader = new StreamReader(imgEntry.Open())
-                        let imgInfo = JsonConvert.DeserializeObject<JSONSourceImage>(imgEntryFileReader.ReadToEnd())
-                        let config = Config.Config(imgInfo.parameters)
-                        config.SetRBCRadius imgInfo.RBCRadius
-                        yield { num = imgNum
-                                config = config
-                                dateLastAnalysis = imgInfo.dateLastAnalysis
-                                img = img
-                                rbcs = imgInfo.rbcs } ] }
\ No newline at end of file