GUI (work in progress..)

[master-thesis.git] / Parasitemia / Parasitemia / GUI / Pia.fs

diff --git a/Parasitemia/Parasitemia/GUI/Pia.fs b/Parasitemia/Parasitemia/GUI/Pia.fs
deleted file mode 100644 (file)
index 1821f26..0000000
--- a/Parasitemia/Parasitemia/GUI/Pia.fs
+++ /dev/null
@@ -1,103 +0,0 @@
-// ParasitemIA file format.
-module Parasitemia.GUI.Pia
-
-open System.Windows
-open System.IO
-open System.IO.Compression
-
-open FSharp.Data
-
-open Emgu.CV
-open Emgu.CV.Structure
-
-open Types
-
-let extension = ".pia"
-let filter = "PIA|*.pia"
-
-type FileData = {
-    sources: SourceImage list
-    patientID: string }
-
-// The json type associated to a source image.
-type JSONSourceImage = JsonProvider<"""
-    {
-        "rbcs": [
-            {
-                "num": 1,
-                "infected": true,
-                "addedManually": false,
-                "removed": false,
-                "posX" : 42.5,
-                "posY" : 42.5,
-                "width" : 10.5,
-                "height" : 10.5,
-                "stainArea" : 10
-            }
-        ]
-    }
-""">
-
-// The json type associated to a file.
-type JSONMainInformation = JsonProvider<"""
-    {
-        "patientID": "1234abcd"
-    }
-""">
-
-let mainFilename = "info.json"
-let imageExtension = ".tiff"
-
-let save (filePath: string) (data: FileData) =
-    use file = ZipFile.Open(filePath, ZipArchiveMode.Update)
-
-    for e in List.ofSeq file.Entries do // 'ofSeq' to not iterate a collection currently modified.
-        e.Delete()
-
-    // Main JSON file.
-    let mainJSON = JSONMainInformation.Root(data.patientID)
-    let mainFile = file.CreateEntry(mainFilename, CompressionLevel.Fastest)
-    use mainFileWriter = new StreamWriter(mainFile.Open())
-    mainJSON.JsonValue.WriteTo(mainFileWriter, JsonSaveOptions.None)
-
-    // Write each images and the associated information.
-    for imgSrc in data.sources do
-        let imgFilename = (string imgSrc.num) + imageExtension
-        let imgEntry = file.CreateEntry(imgFilename, CompressionLevel.NoCompression) // FIXME: It seems a compression is applied to this file despite of the 'NoCompression' flag.
-        imgSrc.img.ToBitmap().Save(imgEntry.Open(), System.Drawing.Imaging.ImageFormat.Tiff)
-
-        let imgJSON =
-            JSONSourceImage.Root([| for rbc in imgSrc.rbcs ->
-                                        JSONSourceImage.Rbc(
-                                            rbc.num,
-                                            rbc.infected, rbc.addedManually, rbc.removed,
-                                            decimal rbc.center.X, decimal rbc.center.Y, decimal rbc.size.Width, decimal rbc.size.Height,
-                                            rbc.stainArea) |])
-
-        let imgJSONEntry = file.CreateEntry(imgFilename + ".json", CompressionLevel.Fastest)
-        use imgJSONFileWriter = new StreamWriter(imgJSONEntry.Open())
-        imgJSON.JsonValue.WriteTo(imgJSONFileWriter, JsonSaveOptions.None)
-
-
-let load (filePath: string) : FileData =
-    use file = ZipFile.Open(filePath, ZipArchiveMode.Read)
-
-    let mainFile = file.GetEntry(mainFilename)
-    let mainJSON = JSONMainInformation.Load(mainFile.Open())
-
-    let sources = [
-        let mutable imgNum = 0
-        for imgEntry in file.Entries do
-            let filename = imgEntry.Name
-            if filename.EndsWith(imageExtension)
-            then
-                let img = new Image<Bgr, byte>(new System.Drawing.Bitmap(imgEntry.Open(), false)) // FIXME: Should we dispose the bitmap?
-                imgNum <- imgNum + 1
-                let imgJSONEntry = file.GetEntry(filename + ".json")
-                let imgJSON = JSONSourceImage.Load(imgJSONEntry.Open())
-                yield { num = imgNum; img = img; rbcs = [ for rbc in imgJSON.Rbcs ->
-                                                            { num = rbc.Num;
-                                                              infected = rbc.Infected; addedManually = rbc.AddedManually; removed = rbc.Removed;
-                                                              center = Point(float rbc.PosX, float rbc.PosY); size = Size(float rbc.Width, float rbc.Height);
-                                                              stainArea = rbc.StainArea } ] } ]
-    { sources = sources; patientID = mainJSON.PatientId }
\ No newline at end of file