X-Git-Url: http://git.euphorik.ch/?p=master-thesis.git;a=blobdiff_plain;f=Parasitemia%2FParasitemia%2FProgram.fs;h=711ec6fd7b85e675ed2db089b11061e8e21f3038;hp=bb61f4f639a6cd8f5b0f08731e5545ed545048a2;hb=999a48b8eb25c92e4403c9280fd4fe68f9bc4b7b;hpb=f4fdf61ef98b913129ddb771392c0bcb1475e6fb diff --git a/Parasitemia/Parasitemia/Program.fs b/Parasitemia/Parasitemia/Program.fs index bb61f4f..711ec6f 100644 --- a/Parasitemia/Parasitemia/Program.fs +++ b/Parasitemia/Parasitemia/Program.fs @@ -4,8 +4,6 @@ open System open System.IO open System.Threading -open FSharp.Collections.ParallelSeq - open Emgu.CV open Emgu.CV.Structure @@ -56,7 +54,7 @@ let main args = factorNbPick = 1.0 - darkStainLevel = 0.25 // Lower -> more sensitive. 0.3. Careful about illumination on the borders. + darkStainLevel = 0.25 // 0.3 maxDarkStainRatio = 0.1 // 10 % infectionArea = 0.012f // 1.2 % @@ -88,16 +86,11 @@ let main args = use resultFile = new StreamWriter(new FileStream(Path.Combine(output, "results.txt"), FileMode.Append, FileAccess.Write)) //try - let images = seq { for file in files -> Path.GetFileNameWithoutExtension(FileInfo(file).Name), new Image(file) } + let images = [ for file in files -> Path.GetFileNameWithoutExtension(FileInfo(file).Name), new Image(file) ] - let nbConcurrentTaskLimit = 4 - let n = Environment.ProcessorCount Utils.logTime "Whole analyze" (fun () -> - let results = - images - |> PSeq.map (fun (id, img) -> id, ImageAnalysis.doAnalysis img id (config.Copy())) - |> PSeq.withDegreeOfParallelism (if n > nbConcurrentTaskLimit then nbConcurrentTaskLimit else n) + let results = ImageAnalysis.doMultipleAnalysis images config for id, cells in results do let total, infected = Utils.countCells cells