X-Git-Url: http://git.euphorik.ch/?p=master-thesis.git;a=blobdiff_plain;f=Parasitemia%2FParasitemia%2FProgram.fs;h=103596a0627831cf7898e717f24271bc7d7c0400;hp=fdbc9087b80f9ca15b2195f512a88fd57a454e68;hb=84fdf7404133803fdf0dc867a4da68a144975191;hpb=b070295cf67b2025164a34b6594e84f0d771cdc9 diff --git a/Parasitemia/Parasitemia/Program.fs b/Parasitemia/Parasitemia/Program.fs index fdbc908..103596a 100644 --- a/Parasitemia/Parasitemia/Program.fs +++ b/Parasitemia/Parasitemia/Program.fs @@ -57,43 +57,36 @@ let parseArgs (args: string[]) : Arguments = let main args = match parseArgs args with | mode, debug -> - let scale = 1. - let config = { - debug = if debug then DebugOn "." else DebugOff + let config = + Config( + { scale = 1. - scale = scale + minRbcRadius = -0.3 + maxRbcRadius = 0.3 - // RBC size range in px at scale = 1.0. - minRBCSize = 20. - maxRBCSize = 42. + preFilterSigma = 1.5 - doGSigma1 = 1.5 - doGSigma2 = 30. - doGLowFreqPercentageReduction = 0.75 + factorNbPick = 1.0 + factorWindowSize = 2.0 - factorNbPick = 1.0 - factorWindowSize = 2.0 + darkStainLevel = 0.4 // Lower -> more sensitive. - darkStainLevel = 0.4 // Lower -> more sensitive. + stainArea = 0.02 + stainLevel = 0.2 - stainSigma = 10. - stainLevel = 0.9 - stainSpreadRequired = 3.0 + infectionArea = 0.06 + infectionLevel = 0.2 + infectionPixelsRequired = 1 - infectionSigma = 2.2 - infectionLevel = 0.85 - infectionPixelsRequired = 1 + maxDarkStainRatio = 0.1 - percentageOfFgValidCell = 0.4 - - MaxDarkStainRatio = 0.1 - - minimumCellArea = 1000. * scale ** 2. |> int - maxOffcenter = 0.5 } + minimumCellArea = 0.3 }) match mode with | CmdLine (input, output) -> - let config = if debug then { config with debug = DebugOn output } else config + if debug + then + config.Debug <- DebugOn output Directory.CreateDirectory output |> ignore @@ -123,6 +116,10 @@ let main args = let app = new Application() let mainWindow = Views.MainWindow() + if debug + then + config.Debug <- DebugOn "." + Utils.log <- (fun m -> log mainWindow m) //display mainWindow img