X-Git-Url: http://git.euphorik.ch/?p=master-thesis.git;a=blobdiff_plain;f=Parasitemia%2FParasitemia%2FGUI%2FState.fs;h=45272cab7de11b7bb1525ee28959e49cfc1986a1;hp=b35b3319fbdbc09807cacd6645da86c4f89ec322;hb=05be8164d308447b916544ae3ce4211500dfd8da;hpb=0af5da4bffad8333c8e57851e067218c0e21d7bb diff --git a/Parasitemia/Parasitemia/GUI/State.fs b/Parasitemia/Parasitemia/GUI/State.fs index b35b331..45272ca 100644 --- a/Parasitemia/Parasitemia/GUI/State.fs +++ b/Parasitemia/Parasitemia/GUI/State.fs @@ -1,6 +1,8 @@ module Parasitemia.GUI.State +open System open System.Collections.Generic +open System.Windows open Emgu.CV open Emgu.CV.Structure @@ -9,30 +11,116 @@ open Types type State () = let sourceImages = List() - let mutable currentImage = -1 + let mutable alteredSinceLastSave = false + let mutable patientID = "" + member this.AlteredSinceLastSave = alteredSinceLastSave + member val CurrentImage: SourceImage option = None with get, set member val FilePath: string = "" with get, set - member val PatientID: string = "" with get, set + + member this.PatientID + with get () : string = patientID + and set id = + if id <> patientID + then + alteredSinceLastSave <- true + patientID <- id + + member this.ImageParasitemia (srcImg: SourceImage) : int * int = + List.length srcImg.rbcs, + srcImg.rbcs |> List.fold (fun nbInfected rbc -> if rbc.infected then nbInfected + 1 else nbInfected) 0 + + member this.GlobalParasitemia : int * int = + sourceImages + |> Seq.fold (fun (nbTotal, nbTotalInfected) srcImg -> + let nb, nbInfected = this.ImageParasitemia srcImg + nbTotal + nb, nbTotalInfected + nbInfected) (0, 0) + + + member this.SetAsInfected (rbc: RBC) (infected: bool) = + if infected <> rbc.infected + then + alteredSinceLastSave <- true + rbc.infected <- infected + rbc.setManually <- not rbc.setManually member this.Save () = - let data = { Pia.sources = []; Pia.patientID = this.PatientID } - Pia.save this.FilePath data + let data = { PiaZ.FileData.patientID = this.PatientID; PiaZ.FileData.images = List.ofSeq sourceImages } + PiaZ.save this.FilePath data + alteredSinceLastSave <- false member this.Load () = - let data = Pia.load this.FilePath + let data = PiaZ.load this.FilePath this.PatientID <- data.patientID + sourceImages.Clear() + sourceImages.InsertRange(0, data.images) + if sourceImages.Count > 0 + then this.CurrentImage <- Some sourceImages.[0] + alteredSinceLastSave <- false - member this.AddSourceImage (filePath: string) : SourceImage = - let srcImg = { num = sourceImages.Count + 1; rbcs = []; img = new Image(filePath) } + member this.AddSourceImage (filePath: string) (defaultConfig: Config.Config) : SourceImage = + let srcImg = { num = sourceImages.Count + 1; config = defaultConfig.Copy(); dateLastAnalysis = DateTime(0L); rbcs = []; img = new Image(filePath) } sourceImages.Add(srcImg) if sourceImages.Count = 1 - then - currentImage <- 1 + then this.CurrentImage <- Some sourceImages.[0] + alteredSinceLastSave <- true srcImg - member x.SourceImages : SourceImage seq = + member this.RemoveSourceImage (srcImg: SourceImage) = + let isCurrent = + match this.CurrentImage with + | Some srcImg' -> srcImg = srcImg' + | _ -> false + + if sourceImages.Remove(srcImg) + then + alteredSinceLastSave <- true + if isCurrent + then + this.CurrentImage <- if sourceImages.Count > 0 then Some sourceImages.[0] else None + // Re-numbered the images. + sourceImages |> Seq.iteri (fun i srcImg -> srcImg.num <- i + 1) + + member this.SetResult (imgNum: int) (cells: Cell list) = + let sourceImage = sourceImages.Find(fun srcImg -> srcImg.num = imgNum) + + let w = sourceImage.img.Width + let h = sourceImage.img.Height + + sourceImage.dateLastAnalysis <- DateTime.UtcNow + + // To match with previously manually altered RBC. + let manuallyAlteredPreviousRBCS = sourceImage.rbcs |> List.filter (fun rbc -> rbc.setManually) + let tolerance = (float sourceImage.config.RBCRadius.Pixel) * 0.5 // +/-. + let getPreviousRBC (center: Point) : RBC option = + manuallyAlteredPreviousRBCS |> List.tryFind (fun rbc -> rbc.center.X > center.X - tolerance && rbc.center.X < center.X + tolerance && + rbc.center.Y > center.Y - tolerance && rbc.center.Y < center.Y + tolerance) + + sourceImage.rbcs <- cells + |> List.filter (fun cell -> match cell.cellClass with HealthyRBC | InfectedRBC -> true | _ -> false ) + |> List.sortByDescending (fun cell -> cell.infectedArea, (w - cell.center.X) + (h - cell.center.Y)) + |> List.mapi (fun i cell -> + let center = Point(float cell.center.X, float cell.center.Y) + let infected, setManually = + match getPreviousRBC center with + | Some rbc -> rbc.infected, true + | _ -> cell.cellClass = InfectedRBC, false + + { num = i + 1 + infected = infected + setManually = setManually + center = center + size = Size(float cell.elements.Width, float cell.elements.Height) + infectedArea = cell.infectedArea }) + + alteredSinceLastSave <- true + + member this.SourceImages : SourceImage seq = sourceImages :> SourceImage seq member this.Reset () = this.PatientID <- "" - sourceImages.Clear() \ No newline at end of file + this.FilePath <- "" + this.CurrentImage <- None + sourceImages.Clear() + alteredSinceLastSave <- false \ No newline at end of file