Parasitemia/Parasitemia/GUI/State.fs

   1 module Parasitemia.GUI.State
   2
   3 open System
   4 open System.Collections.Generic
   5 open System.Windows
   6
   7 open Emgu.CV
   8 open Emgu.CV.Structure
   9
  10 open Types
  11
  12 type State () =
  13     let sourceImages = List<SourceImage>()
  14     let mutable alteredSinceLastSave = false
  15     let mutable patientID = ""
  16
  17     member this.AlteredSinceLastSave = alteredSinceLastSave
  18     member val CurrentImage: SourceImage option = None with get, set
  19     member val FilePath: string = "" with get, set
  20
  21     member this.PatientID
  22         with get () : string = patientID
  23         and set id =
  24             if id <> patientID
  25             then
  26                 alteredSinceLastSave <- true
  27                 patientID <- id
  28
  29     member this.ImageParasitemia (srcImg: SourceImage) : int * int =
  30         List.length srcImg.rbcs,
  31         srcImg.rbcs |> List.fold (fun nbInfected rbc -> if rbc.infected then nbInfected + 1 else nbInfected) 0
  32
  33     member this.GlobalParasitemia : int * int =
  34         sourceImages
  35         |> Seq.fold (fun (nbTotal, nbTotalInfected) srcImg ->
  36                         let nb, nbInfected = this.ImageParasitemia srcImg
  37                         nbTotal + nb, nbTotalInfected + nbInfected) (0, 0)
  38
  39
  40     member this.SetAsInfected (rbc: RBC) (infected: bool) =
  41         if infected <> rbc.infected
  42         then
  43             alteredSinceLastSave <- true
  44             rbc.infected <- infected
  45             rbc.setManually <- not rbc.setManually
  46
  47     member this.Save () =
  48         let data = { PiaZ.FileData.patientID = this.PatientID; PiaZ.FileData.images = List.ofSeq sourceImages }
  49         PiaZ.save this.FilePath data
  50         alteredSinceLastSave <- false
  51
  52     member this.Load () =
  53         let data = PiaZ.load this.FilePath
  54         this.PatientID <- data.patientID
  55         sourceImages.Clear()
  56         sourceImages.InsertRange(0, data.images)
  57         if sourceImages.Count > 0
  58         then this.CurrentImage <- Some sourceImages.[0]
  59         alteredSinceLastSave <- false
  60
  61     member this.AddSourceImage (filePath: string) (defaultConfig: Config.Config) : SourceImage =
  62         let srcImg = { num = sourceImages.Count + 1; config = defaultConfig.Copy(); dateLastAnalysis = DateTime(0L); rbcs = []; img = new Image<Bgr, byte>(filePath) }
  63         sourceImages.Add(srcImg)
  64         if sourceImages.Count = 1
  65         then this.CurrentImage <- Some sourceImages.[0]
  66         alteredSinceLastSave <- true
  67         srcImg
  68
  69     member this.RemoveSourceImage (srcImg: SourceImage) =
  70         let isCurrent =
  71             match this.CurrentImage with
  72             | Some srcImg' -> srcImg = srcImg'
  73             | _ -> false
  74
  75         if sourceImages.Remove(srcImg)
  76         then
  77             alteredSinceLastSave <- true
  78             if isCurrent
  79             then
  80                 this.CurrentImage <- if sourceImages.Count > 0 then Some sourceImages.[0] else None
  81         // Re-numbered the images.
  82         sourceImages |> Seq.iteri (fun i srcImg -> srcImg.num <- i + 1)
  83
  84     member this.SetResult (imgNum: int) (cells: Cell list) =
  85         let sourceImage = sourceImages.Find(fun srcImg -> srcImg.num = imgNum)
  86
  87         let w = sourceImage.img.Width
  88         let h = sourceImage.img.Height
  89
  90         sourceImage.dateLastAnalysis <- DateTime.UtcNow
  91
  92         // To match with previously manually altered RBC.
  93         let manuallyAlteredPreviousRBCS = sourceImage.rbcs |> List.filter (fun rbc -> rbc.setManually)
  94         let tolerance = (float sourceImage.config.RBCRadius.Pixel) * 0.5 // +/-.
  95         let getPreviousRBC (center: Point) : RBC option =
  96             manuallyAlteredPreviousRBCS |> List.tryFind (fun rbc -> rbc.center.X > center.X - tolerance && rbc.center.X < center.X + tolerance &&
  97                                                                     rbc.center.Y > center.Y - tolerance && rbc.center.Y < center.Y + tolerance)
  98
  99         sourceImage.rbcs <- cells
 100             |> List.filter (fun cell -> match cell.cellClass with HealthyRBC | InfectedRBC -> true | _ -> false )
 101             |> List.sortByDescending (fun cell -> cell.infectedArea, (w - cell.center.X) + (h - cell.center.Y))
 102             |> List.mapi (fun i cell ->
 103                 let center = Point(float cell.center.X, float cell.center.Y)
 104                 let infected, setManually =
 105                     match getPreviousRBC center with
 106                     | Some rbc -> rbc.infected, true
 107                     | _ -> cell.cellClass = InfectedRBC, false
 108
 109                 { num = i + 1
 110                   infected = infected
 111                   setManually = setManually
 112                   center = center
 113                   size = Size(float cell.elements.Width, float cell.elements.Height)
 114                   infectedArea = cell.infectedArea })
 115
 116         alteredSinceLastSave <- true
 117
 118     member this.SourceImages : SourceImage seq =
 119         sourceImages :> SourceImage seq
 120
 121     member this.Reset () =
 122         this.PatientID <- ""
 123         this.FilePath <- ""
 124         this.CurrentImage <- None
 125         sourceImages.Clear()
 126         alteredSinceLastSave <- false